Book boutique hotels in San Rafael, CA from CA $163

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Top San Rafael Boutique Hotels

North Bay Inn

855 Francisco Blvd E San Rafael CA

Free cancellation

Reserve now, pay when you stay

CA $145

CA $163 total

Jan 11 - Jan 12, 2026

includes taxes & fees

Stay at this motel in San Rafael. Enjoy free WiFi, free parking, and a 24-hour front desk. Our guests praise the helpful staff and the clean rooms in our reviews. ...

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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

When you travel to San Rafael, you can’t do better than a boutique hotel. Full of local charm and extra style, the best boutique hotels in San Rafael allow you to forget about the cookie-cutter hotels and have an unforgettable stay. If you’re looking for a deal on an intimate boutique hotel, look no further than Travelocity, where you can stay in the hottest parts of San Rafael and have the kind of unique experience you’ll remember for years to come.